Brunel University London
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Simulations of 6PGDH inhibition and 6-PG accumulation.

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posted on 2013-12-05, 02:47 authored by Eduard J. Kerkhoven, Fiona Achcar, Vincent P. Alibu, Richard J. Burchmore, Ian H. Gilbert, Maciej Trybiło, Nicole N. Driessen, David Gilbert, Rainer Breitling, Barbara M. Bakker, Michael P. Barrett

(A–B) The effects of inhibition of 6PGDH on 6-PG concentrations and metabolic fluxes were simulated by reducing Vmax,6PGDH in model C and D at high oxidative stress (kTOX = 200 µl·min−1·mg protein−1). Simulations at low oxidative stress (kTOX = 2 µl·min−1·mg protein−1) are shown in Figure S6. ATP production flux as steady-state flux through PFK is indicated in red, while trypanothione reductase steady-state flux is indicated in yellow, both plotted on the left y-axis. Steady-state concentration of cytosolic (blue) and glycosomal (green) 6-phosphogluconate are plotted on the right y-axis. Shaded areas indicate interquartile ranges. (C) Steady-state flux through glycolysis as a function of the glycosomal 6-PG concentration in model A. A glycosomal 6-PG concentration of around 500 mM reduces the glycolytic flux by 50%.

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